Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791697.1_cds_XP_016508527.1_2087
CDS Infomation

[gene=LOC107826088] [db_xref=GeneID:107826088] [protein=aspartic proteinase-like protein 2] [protein_id=XP_016508527.1] [location=join(67454..67713,68431..68560,68648..68898,69053..69280,69976..70138,70354..70427,70542..70638,70777..70840,73412..73483,73650..73822)] [gbkey=CDS]
Sequence

ATGGGATGCCGCATGAAATTCTTGAATGTGGTTTTGGTGGTGGCGGCGGTGATGGCTGCT
GCCGCCGCCGTGGCCTTCGGAGCTGAGAAATTGCCGGCGGGAGTGCTTAGTTTGGAAAGG
ATTTTTCCTTTGAATGGGAAGATGGAGCTGGAGGAGGTTAGAGCAAGGGACAGAGCTAGG
CATGCTCGAATGTTGCAGAGTTTTGCTGGTGGTATTGTTAATTTTCCTGTTGTCGGTTCA
TCTGACCCTTATCTTGTCGGCCTTTATTTTACAAAAGTAAGACTGGGAACTCCACCAAGA
GAATACAATGTGCAGATCGACACTGGCAGTGATATCCTATGGGTCACATGTAGTTCCTGC
GATGATTGTCCTCGGACAAGTGGACTTGGGGTTGAGCTCAACTTCTATGATGCTACCATC
TCGTCAACTGCTTCTCCCATTTCTTGTGCAGACCAAGTGTGCGCCTCTATAGTTCAAACT
GCCTCCGCTGAGTGCTCTACGGAAACCAATCAGTGTGGTTACTCCTTTCAATATGGAGAT
GGGAGTGGCACAACTGGCCATTACGTAGCCGATTTACTATATTTTGACACAGTCCTGGGA
ACTTCTTTGATTGCCAACTCTTCAGCACCGATTATTTTTGGGTGCAGCACCTCTCAGTCT
GGGGACTTGACCAAGACGGACAGAGCAATTGATGGGATATTTGGGTTTGGTCAACAGGGT
CTTTCAGTAATATCTCAACTGTCTTCTCATCGGATTACTCCTAAAGTATTTTCACATTGC
TTGAAAGGAGAGGGAAATGGTGGAGGTATACTAGTCCTTGGTGAGATTTTGGATCCGAGA
ATCGTATATAGTCCCCTTGTTCCGTCACAGGCGCATTACAATGTATATCTGCAGAGCATT
GCTGTTAATGGACAGTTGGTGCCTGTTGATCCATCAGTGTTTGCGACATCTGGCAATCGA
GGAACTATTGTGGATTCTGGTACAACTTTGGCTTATATTGCCACAGAAGCTTATGATCCC
TTTGTCAATGCTATAACTGCTGCTGTTTCACCATCAGTTAGGCCAATCATCTCACGAGGA
AAACCGTGCTTTCTAGTGTCCTCGAGCATAGCAGAGATATTTCCCCCAGTTTCTCTAAAC
TTTGATGGTGGTGCATCGATGGCTTTAAGACCATCAGACTACCTTGTGCATATGGGCTTT
GTCGAAGGTGCTGCTATGTGGTGCATCGGCTTTGAAAAACAGGATCAAGGTGTAACAATT
TTAGGAGATCTTGTTCTGAAAGATAAGATCTTTGTGTATGACTTAGCTCGGCAAAGGATT
GGATGGGCAGATTATGATTGTTCATCATCTGTGAATGTGTCTATAACCTCTGGCAAGGAT
GAATTTATCAATGCTGGACAGTTAAGCGTGAACCGTGCATCAGGCAGTTTGCTGTTCAAT
CCGCGGCACACTAGAACTATATTTCATCTGCTATCGTTGGTTCTGATGATTGGTTCCCCA
TTTTTAACTTAA

Peptide Sequence

PEP ID

XP_016508527.1
PEP Infomation

PREDICTED: aspartic proteinase-like protein 2 [Nicotiana tabacum]
Sequence

MGCRMKFLNVVLVVAAVMAAAAAVAFGAEKLPAGVLSLERIFPLNGKMELEEVRARDRAR
HARMLQSFAGGIVNFPVVGSSDPYLVGLYFTKVRLGTPPREYNVQIDTGSDILWVTCSSC
DDCPRTSGLGVELNFYDATISSTASPISCADQVCASIVQTASAECSTETNQCGYSFQYGD
GSGTTGHYVADLLYFDTVLGTSLIANSSAPIIFGCSTSQSGDLTKTDRAIDGIFGFGQQG
LSVISQLSSHRITPKVFSHCLKGEGNGGGILVLGEILDPRIVYSPLVPSQAHYNVYLQSI
AVNGQLVPVDPSVFATSGNRGTIVDSGTTLAYIATEAYDPFVNAITAAVSPSVRPIISRG
KPCFLVSSSIAEIFPPVSLNFDGGASMALRPSDYLVHMGFVEGAAMWCIGFEKQDQGVTI
LGDLVLKDKIFVYDLARQRIGWADYDCSSSVNVSITSGKDEFINAGQLSVNRASGSLLFN
PRHTRTIFHLLSLVLMIGSPFLT

Transcript Sequence

Gene sequence data has not been registered.